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iTRAILS v2.0.4 documentation
iTRAILS v2.0.4 documentation
  • Parameterization of the Model
  • Optimization of parameters
  • Viterbi Decoding
  • Posterior Decoding in iTRAILS
  • API Reference
    • combine_states module
    • cutpoints module
    • deepest_ti module
    • expm module
    • get_emission_prob_mat module
    • get_joint_prob_mat module
    • get_tab module
    • get_trans_emiss module
    • helper_omegas module
    • int_combine_states module
    • int_get_emission_prob_mat module
    • int_get_joint_prob_mat module
    • int_get_ordered module
    • int_get_tab module
    • int_get_times module
    • int_get_trans_emiss module
    • int_load_trans_mat module
    • int_optimizer module
    • int_shared_data module
    • int_vanloan module
    • ncpu module
    • optimizer module
    • read_data module
    • run_markov_chain_AB module
    • run_markov_chain_ABC module
    • trans_mat module
    • vanloan module
    • workflow_int_optimize module
    • workflow_int_posterior module
    • workflow_int_viterbi module
    • workflow_optimize module
    • workflow_posterior module
    • workflow_viterbi module
    • yaml_helpers module
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